https://imagej.net/ | | No Text |
https://imagej.net/licensing | | open source |
https://imagej.net/editing | | wiki |
/software/imagej | | ImageJ IMG-ALT ImageJ Logo |
/software/imagej2 | | ImageJ2 IMG-ALT ImageJ2 Logo |
https://imagej.net/software/fiji | | Fiji IMG-ALT Fiji Logo |
https://imagej.net/learn/flavors | | many other flavors |
/list-of-extensions | | extensions |
https://imagej.net/software | | related software projects |
https://imagej.net/ | Anchor | Get Started |
https://imagej.net/downloads | | Download |
https://imagej.net/learn | | Learn |
https://imagej.net/plugins | | Extend |
https://imagej.net/scripting | | Automate |
https://imagej.net/develop | | Develop |
/contribute/citing | | Cite |
https://imagej.net/discuss | | Discuss |
https://imagej.net/contribute | | Contribute |
https://imagej.net/imaging | | image analysis techniques |
/imaging/image-intensity-proce... | | image processing |
/imaging/colocalization-analysis | | colocalization |
/imaging/deconvolution | | deconvolution |
/imaging/registration | | registration |
/imaging/segmentation | | segmentation |
/imaging/tracking | | tracking |
/imaging/visualization | | visualization |
https://imagej.net/plugins | | robust extensibility |
/list-of-extensions | | hundreds of plugins |
/licensing/open-source | Text duplicate | open source |
https://github.com/imagej | External | hosted on GitHub |
https://imagej.net/people | | by and for the scientific imaging community |
https://forum.image.sc/tag/imagej | External Subdomain | Forum |
https://twitter.com/hashtag/Im... | External | Twitter |
https://github.com/imagej | External | GitHub |
http://html5up.net/ | External | HTML5 UP |
https://imagej.net/downloads | Text duplicate | Download |
https://imagej.net/learn | | ImageJ Basics |
https://imagej.net/tutorials | | Tutorials |
/learn/user-guides | | User Guides |
/learn/keyboard-shortcuts | | Keyboard Shortcuts |
/learn/tips-and-tricks | | Tips and Tricks |
/learn/troubleshooting | | Troubleshooting |
https://imagej.net/learn/faq | | Frequently Asked Questions |
https://imagej.net/platforms | | Supported Platforms |
/platforms/windows | | Windows |
/platforms/macos | | MacOS |
/platforms/linux | | Linux |
https://imagej.net/platforms/pi | | Raspberry Pi |
/platforms/android | | Android |
https://imagej.net/formats | | File Formats |
/formats/bio-formats | | Bio-Formats |
https://imagej.net/formats/video | | Video formats |
/formats/quicktime | | QuickTime |
https://imagej.net/formats/tiff | | TIFF |
https://imagej.net/formats/pdf | | PDF |
https://imagej.net/formats/dicom | | DICOM |
https://imagej.net/formats/lsm | | Zeiss LSM |
/formats/olympus | | Olympus VSI |
/formats/lurawave | | Opera Flex |
/formats/fib-sem | | FIB-SEM |
https://imagej.net/imaging | | Scientific Imaging |
/imaging/principles | | Principles of Scientific Imaging |
/imaging/annotating-images | | Annotating Images |
/imaging/colocalization-analysis | | Colocalization |
/imaging/color-image-processing | | Color Image Processing |
/imaging/deconvolution | | Deconvolution |
/imaging/image-intensity-proce... | | Image Intensity Processing |
/imaging/particle-analysis | | Particle Analysis |
/imaging/registration | | Registration |
/imaging/segmentation | | Segmentation |
/imaging/stack-slice-manipulat... | | Stack-slice Manipulations |
/imaging/t-functions | | T-functions |
/imaging/tracking | | Tracking |
/imaging/visualization | | Visualization |
/imaging/z-functions | | Z-functions |
https://imagej.net/plugins | Text duplicate | Extend |
/list-of-extensions | | List of Extensions |
https://imagej.net/update-sites | | Update Sites |
/list-of-update-sites | | List of Update Sites |
/update-sites/following | | Following an Update Site |
/update-sites/setup | | Creating an Update Site |
/update-sites/tos | | Terms of Service |
/update-sites/automatic-uploads | | Automatic Upload |
/update-sites/core-uploads | | Uploading to Core Sites |
/update-sites/faq | | Update Sites FAQ |
/update-sites/stats | | Statistics |
https://imagej.net/scripting | | Scripting |
/scripting/basics | | Scripting Basics |
/scripting/script-editor | | Script Editor |
/scripting/parameters | | Parameters |
/scripting/user-input | | User Input |
/scripting/auto-imports | | Auto Import |
/scripting/templates | | Templates |
/scripting/batch | | Batch Processing |
/scripting/headless | | Running Headlessly |
/scripting/comparisons | | Scripting Comparisons |
/scripting/toolbox | | Toolbox |
/scripting/beanshell | | BeanShell Scripting |
/scripting/groovy | | Groovy Scripting |
/scripting/macro | | ImageJ Macro |
/scripting/javascript | | JavaScript |
/scripting/clojure | | Lisp (Clojure) |
/scripting/matlab | | MATLAB |
/scripting/jython | | Python (Jython) |
/scripting/python | | Python (native) |
/scripting/renjin | | R (Renjin) |
/scripting/jruby | | Ruby (JRuby) |
/scripting/scala | | Scala Scripting |
https://imagej.net/develop | | Development |
/develop/philosophy | | Philosophy |
/develop/architecture | | Architecture |
https://imagej.net/develop/source | | Source code |
/develop/project-management | | Project management |
/develop/coding-style | | Coding style |
/develop/javadoc | | Using Javadoc |
/develop/debugging | | Debugging |
/develop/wish-list | | Wish list |
https://imagej.net/develop/github | Text duplicate | GitHub |
https://imagej.net/develop/maven | | Maven |
https://imagej.net/develop/ci | | CI/CD |
/develop/dotfiles | | Dotfiles |
https://imagej.net/develop/ides | | IDEs |
/develop/eclipse | | Eclipse |
/develop/netbeans | | NetBeans |
/develop/intellij | | IntelliJ IDEA |
/develop/command-line | | Command Line |
/develop/plugins | | Writing plugins |
/develop/improving-the-code | | Contributing to a plugin |
/develop/releasing | | Development lifecycle |
/develop/building-a-pom | | Building a POM |
/develop/debugging-exercises | | Hands-on debugging |
/develop/writing-ops | | Adding new ops |
/develop/formats | | Adding new formats |
/develop/native-libraries | | Using native libraries |
https://imagej.net/develop/tips | | Tips for developers |
/develop/cpp-tips | | Tips for C++ developers |
/develop/ij1-plugins | | ImageJ 1.x plugins |
/develop/versioning | | Versioning |
/develop/logging | | Logging |
/develop/uber-jars | | Uber-JARs |
https://imagej.net/develop/git | | Git |
/develop/git/eclipse | | Git in Eclipse (EGit) |
/develop/git/mini-howto | | Git mini howto |
/develop/git/workshop | | Git workshop |
/develop/git/conflicts | | Git conflicts |
/develop/git/topic-branches | | Git topic branches |
/develop/git/notes | | Git notes |
/develop/git/reflogs | | Git reflogs |
/develop/git/submodules | | Git submodules |
/develop/git/pinpoint-regressions | | How to pinpoint regressions |
/develop/git/publish-a-repository | | How to publish a git repository |
/develop/git/extract-a-subproject | | How to extract a subproject |
https://imagej.net/contribute | Text duplicate | Contribute |
/contribute/citing | | Citing |
https://imagej.net/people | | Contributors |
https://imagej.net/orgs | | Organizations |
/contribute/governance | | Governance |
/contribute/funding | | Funding |
/contribute/fiji | | Contributing to Fiji |
https://imagej.net/licensing | | Licensing |
/licensing/open-source | | Open Source |
/licensing/apache | | Apache |
https://imagej.net/licensing/bsd | | BSD |
https://imagej.net/licensing/epl | | EPL |
https://imagej.net/licensing/gpl | | GPL |
https://imagej.net/licensing/lgpl | | LGPL |
https://imagej.net/licensing/mit | | MIT |
/licensing/public-domain | | Public domain |
https://imagej.net/licensing/big | | BIG |
/licensing/closed-source | | Proprietary |
https://imagej.net/editing | | Editing the Wiki |
/editing/advanced | | Advanced Editing |
/editing/buttons | | Buttons |
/editing/citations | | Citations |
https://imagej.net/editing/code | | Source Code |
/editing/debugging | Text duplicate | Debugging |
/editing/headers | | Headers |
https://imagej.net/editing/icons | | Icons |
https://imagej.net/editing/images | | Images |
https://imagej.net/editing/keys | Text duplicate | Keyboard Shortcuts |
/editing/linking | | Linking |
https://imagej.net/editing/math | | Math Expressions |
/editing/menu-paths | | Menu Paths |
/editing/navigation | | Navigation |
/editing/notices | | Notices |
https://imagej.net/editing/people | | People |
/editing/pitfalls | | Pitfalls |
/editing/quizzes | | Quizzes |
/editing/statbox | | Statbox |
/editing/symbols | | Symbols |
https://imagej.net/editing/tables | | Tables |
/editing/timelines | | Timelines |
/editing/tooltips | | Tooltips |
https://imagej.net/editing/videos | | Videos |
/editing/whitespace | | Whitespace |
https://imagej.net/discuss | Text duplicate | Discuss |
https://imagej.net/discuss/bugs | | Reporting Issues |
/discuss/mailing-lists | | Mailing Lists |
https://imagej.net/discuss/chat | | Chat |
https://imagej.net/news | | News |
https://imagej.net/events | | Events |
/events/presentations | | Presentations |
/events/conferences | | Conferences |
/events/hackathons | | Hackathons |
https://imagej.net/events | | More... |
https://imagej.net/libs | | Libraries |
/libs/imagej-ops | | ImageJ Ops |
/libs/imagej-common | | ImageJ Common |
/libs/imagej-legacy | | ImageJ Legacy |
https://imagej.net/libs/scijava | | SciJava |
https://imagej.net/libs/scifio | | SCIFIO |
https://imagej.net/libs/imglib2 | | ImgLib2 |
/libs/imglib2/getting-started | | Getting Started |
/libs/imglib2/accessors | | Accessors |
/libs/imglib2/accessibles | | Accessibles |
/libs/imglib2/examples | | Examples |
/libs/imglib2/workshop-introdu... | | Introductory Workshop |
/libs/imglib2/workshop-advanced | | Advanced Workshop |
/libs/imglib2/matlab | | ImgLib2 images in MATLAB |
/libs/imglib2/benchmarks | | Benchmarks |
/libs/imglib2/faq | | FAQ |
/libs/imglib2/developing | | Developing ImgLib2 |
/libs/imglib2/discussion | | ImgLib2 Discussion |
https://imagej.net/libs | Text duplicate | More... |
https://imagej.net/software | | Software |
/software/nih-image | | NIH Image |
/software/imagej | Text duplicate | ImageJ |
/software/imagej2 | Text duplicate | ImageJ2 |
https://imagej.net/software/fiji | Text duplicate | Fiji |
https://imagej.net/software | Text duplicate | More... |
(Nice to have)